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  5. Brara.C00549.1

Brara.C00549.1


Description : component *(PnsL5) of NDH lumen subcomplex L & peptidyl-prolyl cis-trans isomerase & EC_5.2 cis-trans-isomerase


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.C00549.1
Cluster HCAA Clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Bradi2g11060 No alias rotamase CYP 4 0.03 Orthogroups_2024-Update
Bradi2g39950 No alias cyclophilin 20-2 0.02 Orthogroups_2024-Update
GRMZM2G063244 No alias rotamase CYP 4 0.02 Orthogroups_2024-Update
GRMZM2G401848 No alias rotamase CYP 3 0.03 Orthogroups_2024-Update
Glyma.10G139500 No alias rotamase CYP 4 0.03 Orthogroups_2024-Update
HORVU1Hr1G000710.1 No alias component *(PnsL5) of NDH lumen subcomplex L &... 0.04 Orthogroups_2024-Update
HORVU4Hr1G000910.3 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.03 Orthogroups_2024-Update
Kfl00086_0260 kfl00086_0260_v1.1 (at3g63400 : 172.0) Cyclophilin-like peptidyl-prolyl... 0.03 Orthogroups_2024-Update
LOC_Os09g39780 No alias peptidyl-prolyl cis-trans isomerase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G060200 No alias cyclophilin 20-2 0.04 Orthogroups_2024-Update
Seita.2G054500.1 No alias peptidyl-prolyl cis-trans isomerase *(CYP63/CYP95) &... 0.03 Orthogroups_2024-Update
Sobic.009G001500.1 No alias component *(PnsL5) of NDH lumen subcomplex L &... 0.04 Orthogroups_2024-Update
Sopen01g005550 No alias Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA 16Dec
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 94 242
No external refs found!