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  5. Brara.C00575.1

Brara.C00575.1


Description : abscisic acid perception modulator *(ABAR) & component *(CHLH) of magnesium-chelatase complex


Gene families : OG_42_0006102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00575.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
144086 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.05 Orthogroups_2024-Update
A4A49_01880 No alias magnesium-chelatase subunit chlh, chloroplastic 0.04 Orthogroups_2024-Update
At5g13630 No alias Magnesium-chelatase subunit ChlH, chloroplastic... 0.05 Orthogroups_2024-Update
Cre07.g325500 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.04 Orthogroups_2024-Update
Glyma.03G137000 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.05 Orthogroups_2024-Update
Glyma.19G139300 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.04 Orthogroups_2024-Update
HORVU2Hr1G023560.2 No alias component *(CHLH) of magnesium-chelatase complex &... 0.05 Orthogroups_2024-Update
Kfl00137_0250 kfl00137_0250_v1.1 (at5g13630 : 2070.0) Encodes magnesium chelatase... 0.03 Orthogroups_2024-Update
LOC_Os03g20700 No alias magnesium-chelatase, putative, expressed 0.02 Orthogroups_2024-Update
Mp8g10280.1 No alias component CHL-H of magnesium-chelatase complex. ABAR... 0.03 Orthogroups_2024-Update
Potri.006G051100 No alias magnesium-chelatase subunit chlH, chloroplast, putative... 0.05 Orthogroups_2024-Update
Pp1s348_32V6 No alias magnesium chelatase h subunit 0.04 Orthogroups_2024-Update
Seita.7G217800.1 No alias abscisic acid perception modulator *(ABAR) & component... 0.11 Orthogroups_2024-Update
Sobic.006G264900.1 No alias component *(CHLH) of magnesium-chelatase complex &... 0.07 Orthogroups_2024-Update
Solyc04g015750 No alias Magnesium chelatase H subunit (AHRD V3.3 *** F8SPG3_CAMSI) 0.05 Orthogroups_2024-Update
Sopen04g007830 No alias CobN/Magnesium Chelatase 0.07 Orthogroups_2024-Update
evm.model.contig_431.16 No alias (at5g13630 : 1748.0) Encodes magnesium chelatase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016851 magnesium chelatase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022571 Mg_chelatase_H_N 79 241
IPR003672 CobN/Mg_chltase 245 1362
No external refs found!