1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C00725.1

Brara.C00725.1


Description : lipid droplet biogenesis factor *(SEIPIN)


Gene families : OG_42_0002230 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00725.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
At5g16460 No alias Seipin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFD9] 0.03 Orthogroups_2024-Update
Sobic.002G276700.1 No alias lipid droplet biogenesis factor *(SEIPIN) 0.02 Orthogroups_2024-Update
Sobic.005G036200.2 No alias lipid droplet biogenesis factor *(SEIPIN) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0019915 lipid storage IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
InterPro domains Description Start Stop
IPR009617 Seipin 96 291
No external refs found!