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  5. Brara.C00745.1

Brara.C00745.1


Description : ubiquitin adaptor protein *(TOL)


Gene families : OG_42_0002377 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00745.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Sobic.001G283500.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA 16Dec
MF GO:0043130 ubiquitin binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR004152 GAT_dom 243 315
IPR002014 VHS_dom 48 181
No external refs found!