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  5. Brara.C00758.1

Brara.C00758.1


Description : phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0001912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00758.1
Cluster HCAA Clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G283400 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
MA_86494g0010 No alias (at5g17230 : 553.0) Encodes phytoene synthase.; PHYTOENE... 0.03 Orthogroups_2024-Update
Pp1s323_70V6 No alias phytoene synthase 0.02 Orthogroups_2024-Update
Solyc03g031860 No alias Phytoene synthase 1 0.03 Orthogroups_2024-Update
Sopen02g025960 No alias Squalene/phytoene synthase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002060 Squ/phyt_synthse 139 394
No external refs found!