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  5. Brara.C00761.1

Brara.C00761.1


Description : transcription factor *(REVEILLE)


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00761.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
At3g09600 No alias Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] 0.03 Orthogroups_2024-Update
At4g01280 No alias Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5] 0.04 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.04 Orthogroups_2024-Update
Brara.B00704.1 No alias transcription factor *(REVEILLE) 0.05 Orthogroups_2024-Update
Brara.E01373.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
GRMZM2G029850 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G118693 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G170322 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G241000 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G255302 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G211643 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G136300 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G210600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G044200 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G031850.2 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
HORVU6Hr1G066000.2 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
HORVU6Hr1G066450.5 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
HORVU7Hr1G001830.3 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
HORVU7Hr1G121210.4 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
LOC_Os02g45670 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g46030 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g01670 No alias myb-like DNA-binding domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_115536g0010 No alias (at1g01060 : 122.0) LHY encodes a myb-related putative... 0.03 Orthogroups_2024-Update
Potri.002G163100 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.004G074300 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.017G144800 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.4G266800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Sobic.010G004300.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Solyc01g095030 No alias Myb family transcription factor family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen01g038820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g011740 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
evm.model.contig_2210.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 48 91
No external refs found!