Brara.C00832.1

Description : subgroup ERF-VIII transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C00832.1
Cluster	HCAA Clusters: Cluster_400

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.04	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.04	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.04	Orthogroups_2024-Update
A4A49_21979	No alias	ethylene-responsive transcription factor erf034	0.04	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.04	Orthogroups_2024-Update
A4A49_34891	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
At1g22985	No alias	CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]	0.03	Orthogroups_2024-Update
At1g53910	No alias	Ethylene-responsive transcription factor RAP2-12...	0.03	Orthogroups_2024-Update
At2g20880	No alias	Ethylene-responsive transcription factor ERF053...	0.05	Orthogroups_2024-Update
At2g40220	No alias	Ethylene-responsive transcription factor ABI4...	0.03	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.03	Orthogroups_2024-Update
At5g25390	No alias	SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7]	0.03	Orthogroups_2024-Update
At5g25810	No alias	Tny [Source:UniProtKB/TrEMBL;Acc:A0A178URN2]	0.03	Orthogroups_2024-Update
At5g65130	No alias	Integrase-type DNA-binding superfamily protein...	0.04	Orthogroups_2024-Update
At5g67000	No alias	Ethylene-responsive transcription factor ERF122...	0.03	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g24110	No alias	related to AP2 10	0.03	Orthogroups_2024-Update
Brara.A00511.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.A03156.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Brara.B00526.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.C00211.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.G03526.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.H00147.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.H01575.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.04	Orthogroups_2024-Update
Brara.H01576.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.04	Orthogroups_2024-Update
Brara.H01997.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.J00420.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.K00042.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G099326	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G295300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.11G035100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.14G147500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
HORVU1Hr1G070410.3	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU1Hr1G082310.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
PSME_00039617-RA	No alias	(at4g17500 : 120.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
Potri.001G004700	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.002G065600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.003G220200	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G104200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.015G136300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Seita.4G252600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.8G173100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G331300.2	No alias	subgroup ERF-V transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.008G145000.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
Sobic.009G111200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc07g054220	No alias	Ethylene-responsive transcription factor ERF053 (AHRD...	0.02	Orthogroups_2024-Update
Solyc10g076370	No alias	Dehydration-responsive element binding protein (AHRD...	0.04	Orthogroups_2024-Update
Sopen03g041270	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen08g004160	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen12g003310	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0009607	response to biotic stimulus	IEP	Predicted GO
BP	GO:0009620	response to fungus	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
BP	GO:0043207	response to external biotic stimulus	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
BP	GO:0050832	defense response to fungus	IEP	Predicted GO
BP	GO:0051704	multi-organism process	IEP	Predicted GO
BP	GO:0051707	response to other organism	IEP	Predicted GO
BP	GO:0098542	defense response to other organism	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	55	101

External Links

No external refs found!

Brara.C00832.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation