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  5. Brara.C00853.1

Brara.C00853.1


Description : Unknown function


Gene families : OG_42_0000773 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00853.1
Cluster HCAA Clusters: Cluster_343

Target Alias Description ECC score Gene Family Method Actions
At1g60400 No alias F-box protein At1g60400 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFI4] 0.02 Orthogroups_2024-Update
At1g78740 No alias RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IBU4] 0.02 Orthogroups_2024-Update
At1g78840 No alias Putative F-box/FBD/LRR-repeat protein At1g78840... 0.02 Orthogroups_2024-Update
At5g44970 No alias Protein with RNI-like/FBD-like domain... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019786 Atg8-specific protease activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 360 401
IPR001810 F-box_dom 14 49
IPR013101 Leu-rich_rpt_2 161 186
No external refs found!