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  5. Brara.C00879.1

Brara.C00879.1


Description : Unknown function


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00879.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
MA_136157g0010 No alias (at5g19420 : 1024.0) Regulator of chromosome... 0.03 Orthogroups_2024-Update
Potri.001G026900 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
Solyc12g099740 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001849 PH_domain 23 129
IPR000306 Znf_FYVE 656 722
IPR027988 BRX_N 913 947
IPR013591 Brevis_radix_dom 1028 1083
IPR000408 Reg_chr_condens 605 652
IPR000408 Reg_chr_condens 382 432
IPR000408 Reg_chr_condens 499 548
IPR000408 Reg_chr_condens 331 379
IPR000408 Reg_chr_condens 436 484
IPR000408 Reg_chr_condens 551 600
No external refs found!