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  5. Brara.C00969.1

Brara.C00969.1


Description : substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00969.1
Cluster HCAA Clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61167 No alias BTB-POZ and MATH domain 2 0.02 Orthogroups_2024-Update
Bradi3g18500 No alias BTB-POZ and MATH domain 4 0.02 Orthogroups_2024-Update
Bradi3g40736 No alias BTB-POZ and MATH domain 1 0.04 Orthogroups_2024-Update
Bradi4g23737 No alias BTB-POZ and MATH domain 1 0.04 Orthogroups_2024-Update
Bradi5g22362 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Bradi5g22368 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G106750.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G246600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G264500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G181900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G190900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G081100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G199500.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 191 310
IPR002083 MATH/TRAF_dom 52 162
No external refs found!