Brara.C01013.1


Description : EC_2.4 glycosyltransferase & mannan synthase *(CSLA)


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01013.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_03777 No alias putative xyloglucan glycosyltransferase 12 0.03 Orthogroups_2024-Update
LOC_Os09g25900 No alias CSLC2 - cellulose synthase-like family C, expressed 0.02 Orthogroups_2024-Update
PSME_00039709-RA No alias (at5g03760 : 369.0) encodes a beta-mannan synthase that... 0.02 Orthogroups_2024-Update
Potri.002G114200 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
Potri.008G026400 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
Pp1s15_115V6 No alias cellulose synthase-like glycosyltransferase family 2 0.03 Orthogroups_2024-Update
Pp1s435_10V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.2G139000.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
Sobic.004G238700.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
Sobic.007G090600.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc10g083670 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO) 0.03 Orthogroups_2024-Update
Sopen05g033850 No alias Glycosyltransferase like family 2 0.03 Orthogroups_2024-Update
Sopen09g003750 No alias Glycosyltransferase like family 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 190 388
No external refs found!