1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C01174.1

Brara.C01174.1


Description : aldehyde-generating component *(CER3) of CER1-CER3 alkane-forming complex


Gene families : OG_42_0000480 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01174.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
At1g02205 No alias Fatty acid hydroxylase superfamily [Source:TAIR;Acc:AT1G02205] 0.04 Orthogroups_2024-Update
At2g37700 No alias Fatty acid hydroxylase superfamily [Source:TAIR;Acc:AT2G37700] 0.03 Orthogroups_2024-Update
At5g57800 No alias Protein ECERIFERUM 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Z0] 0.04 Orthogroups_2024-Update
Brara.C01895.1 No alias aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 Orthogroups_2024-Update
Brara.D02301.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D02306.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G101200 No alias Fatty acid hydroxylase superfamily 0.05 Orthogroups_2024-Update
Glyma.03G101700 No alias Fatty acid hydroxylase superfamily 0.04 Orthogroups_2024-Update
PSME_00012546-RA No alias (at1g02205 : 552.0) Expression of the CER1 gene... 0.02 Orthogroups_2024-Update
Seita.6G166000.1 No alias aldehyde-generating component *(CER3) of CER1-CER3... 0.03 Orthogroups_2024-Update
Sobic.002G207900.1 No alias aldehyde-generating component *(CER3) of CER1-CER3... 0.05 Orthogroups_2024-Update
Sobic.004G342000.1 No alias aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.05 Orthogroups_2024-Update
Sobic.010G212600.1 No alias aldehyde-generating component *(CER3) of CER1-CER3... 0.02 Orthogroups_2024-Update
Solyc01g088410 No alias Fatty acid hydroxylase superfamily (AHRD V3.3 *** AT1G02205.5) 0.03 Orthogroups_2024-Update
Solyc03g117800 No alias Fatty acid hydroxylase superfamily (AHRD V3.3 *** AT5G57800.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA 16Dec
BP GO:0008610 lipid biosynthetic process IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 132 273
IPR021940 Uncharacterised_Wax2_C 455 623
No external refs found!