1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C01186.1

Brara.C01186.1


Description : bifunctional diaminopelargonic acid (DAPA) aminotransferase and dethiobiotin synthetase


Gene families : OG_42_0006044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01186.1
Cluster HCAA Clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Kfl00344_0040 kfl00344_0040_v1.1 (at5g57590 : 458.0) Mutant complemented by E coli Bio A... 0.02 Orthogroups_2024-Update
Seita.6G093600.1 No alias bifunctional diaminopelargonic acid (DAPA)... 0.02 Orthogroups_2024-Update
Sobic.001G465700.1 No alias bifunctional diaminopelargonic acid (DAPA)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 439 544
IPR005814 Aminotrans_3 612 858
No external refs found!