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  5. Brara.C01191.1

Brara.C01191.1


Description : Unknown function


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01191.1
Cluster HCAA Clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
At3g28510 No alias AAA-ATPase At3g28510 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH84] 0.04 Orthogroups_2024-Update
PSME_00056372-RA No alias (at5g57480 : 614.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
Potri.005G119200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Potri.007G020500 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Pp1s108_16V6 No alias atp binding 0.02 Orthogroups_2024-Update
Pp1s28_198V6 No alias atp binding 0.02 Orthogroups_2024-Update
Pp1s325_27V6 No alias atp binding 0.02 Orthogroups_2024-Update
Seita.2G333200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G051600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G319766.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G319900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G191300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g080680 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Sopen04g034270 No alias Domain associated at C-terminal with AAA 0.02 Orthogroups_2024-Update
Sopen05g003350 No alias Domain associated at C-terminal with AAA 0.03 Orthogroups_2024-Update
Sopen10g003100 No alias Domain associated at C-terminal with AAA 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 241 388
IPR025753 AAA_N_dom 26 118
No external refs found!