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  5. Brara.C01197.1

Brara.C01197.1


Description : villin actin-crosslinking factor


Gene families : OG_42_0000618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01197.1
Cluster HCAA Clusters: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
Bradi3g18707 No alias villin 4 0.03 Orthogroups_2024-Update
PSME_00032152-RA No alias (at3g57410 : 216.0) Encodes a protein with high homology... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA 16Dec
BP GO:0007010 cytoskeleton organization IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 911 946
IPR007123 Gelsolin-like_dom 638 709
IPR007123 Gelsolin-like_dom 30 112
IPR007123 Gelsolin-like_dom 150 217
IPR007123 Gelsolin-like_dom 267 336
No external refs found!