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  5. Brara.C01219.1

Brara.C01219.1


Description : component *(NOT2) of mRNA deadenylation CCR4-NOT complex


Gene families : OG_42_0002303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01219.1
Cluster HCAA Clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
Pp1s40_41V6 No alias ccr4-not transcription complex 0.02 Orthogroups_2024-Update
Solyc11g072940 No alias CCR4-NOT transcription complex subunit 2 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!