Brara.C01245.1

Description : Unknown function

Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C01245.1
Cluster	HCAA Clusters: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method	Actions
PSME_00024702-RA	No alias	(at5g56510 : 204.0) Encodes a member of the Arabidopsis...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0120009	intermembrane lipid transfer	IEP	Predicted GO
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	444	462
IPR001313	Pumilio_RNA-bd_rpt	337	367
IPR001313	Pumilio_RNA-bd_rpt	372	392
IPR001313	Pumilio_RNA-bd_rpt	521	539
IPR001313	Pumilio_RNA-bd_rpt	480	512
IPR001313	Pumilio_RNA-bd_rpt	407	440
IPR001313	Pumilio_RNA-bd_rpt	260	293
IPR001313	Pumilio_RNA-bd_rpt	296	328

External Links

No external refs found!