1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C01274.1

Brara.C01274.1


Description : calcium sensor *(CBL)


Gene families : OG_42_0000326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01274.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
A4A49_34699 No alias calcineurin b-like protein 1 0.03 Orthogroups_2024-Update
At4g01420 No alias Calcineurin B-like protein 5... 0.03 Orthogroups_2024-Update
Bradi4g41910 No alias calcineurin B-like 3 0.03 Orthogroups_2024-Update
GRMZM2G007555 No alias calcineurin B-like 3 0.03 Orthogroups_2024-Update
GRMZM2G110080 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
LOC_Os02g18930 No alias calcineurin B, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s65_59V6 No alias calcineurin b-like protein 0.03 Orthogroups_2024-Update
Seita.1G130300.1 No alias calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL) 0.03 Orthogroups_2024-Update
Seita.9G318100.1 No alias calcium sensor *(CBL) 0.04 Orthogroups_2024-Update
Sobic.009G210300.1 No alias calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 76 121
IPR002048 EF_hand_dom 134 200
No external refs found!