Brara.C01311.1


Description : SMARCJ component *(BDH) of SWI/SNF chromatin remodeling complex


Gene families : OG_42_0003280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01311.1
Cluster HCAA Clusters: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
Sopen04g006820 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0008290 F-actin capping protein complex IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030834 regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030835 negative regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030837 negative regulation of actin filament polymerization IEP Predicted GO
BP GO:0031333 negative regulation of protein complex assembly IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032272 negative regulation of protein polymerization IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0043242 negative regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0051016 barbed-end actin filament capping IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051693 actin filament capping IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901879 regulation of protein depolymerization IEP Predicted GO
BP GO:1901880 negative regulation of protein depolymerization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!