Brara.C01398.1

Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C01398.1
Cluster	HCAA Clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
104980	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.03	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
At2g25820	No alias	Ethylene-responsive transcription factor ERF042...	0.04	Orthogroups_2024-Update
At2g33710	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At2g40350	No alias	Integrase-type DNA-binding superfamily protein...	0.04	Orthogroups_2024-Update
At5g05410	No alias	Dehydration-responsive element-binding protein 2A...	0.03	Orthogroups_2024-Update
Bradi2g04000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A00159.1	No alias	subgroup ERF-II-DEAR transcription factor	0.04	Orthogroups_2024-Update
Brara.A03156.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.B00526.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.F03308.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
Brara.J00612.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Glyma.05G049900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.05G063600	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.08G137600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G194800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.12G117000	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Glyma.12G162700	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Glyma.13G088100	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Glyma.17G210500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G080790.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
HORVU7Hr1G089930.5	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
MA_201698g0010	No alias	(at5g11590 : 124.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_2446g0010	No alias	(at2g20880 : 136.0) Integrase-type DNA-binding...	0.02	Orthogroups_2024-Update
MA_83118g0010	No alias	(at1g78080 : 90.5) Encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00016017-RA	No alias	(at5g25190 : 150.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00056197-RA	No alias	(at5g67190 : 143.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.007G090600	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.008G091300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.012G134000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.014G126100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Pp1s127_75V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s8_127V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Seita.3G031600.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G442100.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G084600.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G087600.2	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G058732.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G240500.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Solyc04g054910	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc05g013540	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen02g037700	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g027720	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006749	glutathione metabolic process	IEP	Predicted GO
BP	GO:0006751	glutathione catabolic process	IEP	Predicted GO
CC	GO:0016272	prefoldin complex	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Predicted GO
BP	GO:0043171	peptide catabolic process	IEP	Predicted GO
BP	GO:0044273	sulfur compound catabolic process	IEP	Predicted GO
BP	GO:0051187	cofactor catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	121	170

External Links

No external refs found!

Brara.C01398.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation