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Description : circadian clock factor *(REVEILLE) & transcription factor *(REVEILLE)
Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C01424.1 | |
| Cluster | HCAA Clusters: Cluster_97 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At2g46830 | No alias | Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973] | 0.03 | Orthogroups_2024-Update | |
| At3g09600 | No alias | Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] | 0.03 | Orthogroups_2024-Update | |
| At5g02840 | No alias | LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] | 0.03 | Orthogroups_2024-Update | |
| Bradi1g29680 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g51757 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.C00086.1 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.03 | Orthogroups_2024-Update | |
| Brara.J01819.1 | No alias | transcription factor *(REVEILLE) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G029850 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G170148 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G170322 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G177300 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G031850.2 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G066000.2 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G121210.4 | No alias | transcription factor *(REVEILLE) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os06g01670 | No alias | myb-like DNA-binding domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Pp1s96_165V6 | No alias | lhy protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G272700.1 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G281800.1 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_2025.19 | No alias | (at5g52660 : 115.0) Homeodomain-like superfamily... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Predicted GO |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 58 | 103 |
| No external refs found! |