Brara.C01428.1

Description : component *(cpTatB) of thylakoid membrane Tat translocation system & protein involved in PS-II assembly *(HCF106)

Gene families : OG_42_0006691 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006691_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C01428.1
Cluster	HCAA Clusters: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g39520	No alias	Bacterial sec-independent translocation protein mttA/Hcf106	0.03	Orthogroups_2024-Update
Cre08.g371650	No alias	Bacterial sec-independent translocation protein mttA/Hcf106	0.02	Orthogroups_2024-Update
GRMZM2G151529	No alias	Bacterial sec-independent translocation protein mttA/Hcf106	0.04	Orthogroups_2024-Update
Seita.5G379700.1	No alias	component *(cpTatB) of thylakoid membrane Tat...	0.02	Orthogroups_2024-Update
Sobic.006G055800.1	No alias	component *(cpTatB) of thylakoid membrane Tat...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	IEA	16Dec
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003369	TatA/B/E	85	135

External Links

No external refs found!