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  5. Brara.C01506.1

Brara.C01506.1


Description : regulatory protein (CIB) of blue light perception & bHLH-type transcription factor


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01506.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_07602 No alias transcription factor bhlh62 0.02 Orthogroups_2024-Update
A4A49_35201 No alias transcription factor hbi1 0.03 Orthogroups_2024-Update
Brara.A00369.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Brara.B03444.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
GRMZM2G144275 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G176289 No alias cryptochrome-interacting basic-helix-loop-helix 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G067250.4 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
PSME_00000014-RA No alias (at1g68920 : 227.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
PSME_00019949-RA No alias (at1g68920 : 206.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00020009-RA No alias (at1g68920 : 136.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Sobic.010G191100.2 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Sopen01g051890 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g006760 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g028560 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 157 204
No external refs found!