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  5. Brara.C01554.1

Brara.C01554.1


Description : Unknown function


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01554.1
Cluster HCAA Clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Brara.C02211.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00039570-RA No alias (p29023|chib_maize : 253.0) Endochitinase B precursor... 0.02 Orthogroups_2024-Update
PSME_00050586-RA No alias (p29022|chia_maize : 243.0) Endochitinase A precursor... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
MF GO:0008061 chitin binding IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 25 57
IPR000726 Glyco_hydro_19_cat 219 265
IPR000726 Glyco_hydro_19_cat 72 213
No external refs found!