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  5. Brara.C01696.1

Brara.C01696.1


Description : chaperone *(Hsp60)


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01696.1
Cluster HCAA Clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
165043 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
168153 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.04 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi2g18260 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.07 Orthogroups_2024-Update
Bradi5g02890 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.H00053.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.03 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
GRMZM2G434173 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.06 Orthogroups_2024-Update
Glyma.11G195900 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Glyma.20G079300 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.20G197100 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
HORVU0Hr1G038830.19 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.05 Orthogroups_2024-Update
Mp6g16880.1 No alias chaperone (Hsp60) 0.02 Orthogroups_2024-Update
Potri.002G252900 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Pp1s276_75V6 No alias ru large subunit-binding protein subunit beta 0.02 Orthogroups_2024-Update
Seita.2G129300.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.06 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.06 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.03 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc03g121640 No alias Chaperonin Cpn60 (AHRD V3.3 *** A0A124SDT3_CYNCS) 0.06 Orthogroups_2024-Update
Solyc05g053470 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.03 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.07 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.07 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
Sopen11g028490 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.01 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 54 555
No external refs found!