Brara.C01731.1


Description : Unknown function


Gene families : OG_42_0000872 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01731.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G066225 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G063500 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G085590.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g37900 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 118 175
No external refs found!