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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C01806.1 | |
| Cluster | HCAA Clusters: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_18116 | No alias | ring-h2 finger protein atl78 | 0.01 | Orthogroups_2024-Update | |
| A4A49_18667 | No alias | ring-h2 finger protein atl18 | 0.01 | Orthogroups_2024-Update | |
| A4A49_40065 | No alias | ring-h2 finger protein atl70 | 0.01 | Orthogroups_2024-Update | |
| A4A49_59878 | No alias | ring-h2 finger protein atl60 | 0.01 | Orthogroups_2024-Update | |
| Brara.B02267.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.01 | Orthogroups_2024-Update | |
| Brara.E01886.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G143350 | No alias | TOXICOS EN LEVADURA 2 | 0.01 | Orthogroups_2024-Update | |
| Glyma.15G056000 | No alias | RING/U-box superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.16G194600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G079910.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g64620 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os11g02260 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os11g39640 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| MA_634100g0010 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| Mp6g19130.1 | No alias | no hits & (original description: none) | 0.03 | Orthogroups_2024-Update | |
| Potri.001G141200 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G189800.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G344400.1 | No alias | Unknown function | 0.08 | Orthogroups_2024-Update | |
| Sobic.010G157300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.01 | Orthogroups_2024-Update | |
| Solyc06g051250 | No alias | LOW QUALITY:RING/U-box superfamily protein, putative... | 0.01 | Orthogroups_2024-Update | |
| Sopen06g022910 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 99 | 141 |
| No external refs found! |