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  5. Brara.C01824.1

Brara.C01824.1


Description : Unknown function


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01824.1
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
A4A49_31032 No alias zinc finger a20 and an1 domain-containing... 0.03 Orthogroups_2024-Update
At3g52800 No alias A20/AN1-like zinc finger family protein... 0.04 Orthogroups_2024-Update
Bradi3g39850 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
GRMZM2G071042 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G050270.3 No alias Unknown function 0.05 Orthogroups_2024-Update
Kfl00023_0120 kfl00023_0120_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.6G203700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen12g034680 No alias AN1-like Zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000058 Znf_AN1 101 137
IPR002653 Znf_A20 14 36
No external refs found!