Brara.C01871.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C01871.1
Cluster	HCAA Clusters: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
56793	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
92733	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
At3g01970	No alias	Probable WRKY transcription factor 45...	0.04	Orthogroups_2024-Update
At3g56400	No alias	Probable WRKY transcription factor 70...	0.03	Orthogroups_2024-Update
At5g49520	No alias	Probable WRKY transcription factor 48...	0.03	Orthogroups_2024-Update
Bradi4g33370	No alias	WRKY DNA-binding protein 2	0.03	Orthogroups_2024-Update
Bradi5g17395	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Brara.C02270.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.D02837.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00945.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F00929.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03624.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02789.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G304573	No alias	WRKY DNA-binding protein 9	0.03	Orthogroups_2024-Update
GRMZM2G432583	No alias	WRKY DNA-binding protein 62	0.03	Orthogroups_2024-Update
GRMZM5G863420	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Glyma.04G054200	No alias	WRKY DNA-binding protein 50	0.05	Orthogroups_2024-Update
Glyma.04G223200	No alias	WRKY DNA-binding protein 55	0.03	Orthogroups_2024-Update
Glyma.06G142000	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Glyma.07G023300	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Glyma.10G011300	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Glyma.15G135600	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Glyma.16G176700	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G080300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G090130.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G029430.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G029460.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G058670.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G028790.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os06g44010	No alias	WRKY28, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g02060	No alias	WRKY29, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g48260	No alias	WRKY47, expressed	0.02	Orthogroups_2024-Update
PSME_00028885-RA	No alias	(at5g15130 : 194.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00039002-RA	No alias	(at5g26170 : 112.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.001G208600	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
Potri.002G164900	No alias	WRKY DNA-binding protein 43	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.003G182200	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.006G105300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Potri.006G224100	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
Potri.006G263600	No alias	WRKY DNA-binding protein 18	0.03	Orthogroups_2024-Update
Potri.008G091900	No alias	WRKY DNA-binding protein 4	0.03	Orthogroups_2024-Update
Potri.011G007800	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Potri.014G119800	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Potri.014G155100	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Seita.1G062100.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Seita.3G139400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G282000.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G001000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G307700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G361700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G378000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G132800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G301900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.9G421700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G083000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G174300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G341100.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G298400.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G092100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G238200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sopen01g038890	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen05g034160	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
CC	GO:0005669	transcription factor TFIID complex	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009607	response to biotic stimulus	IEP	Predicted GO
BP	GO:0009617	response to bacterium	IEP	Predicted GO
BP	GO:0009620	response to fungus	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
BP	GO:0042742	defense response to bacterium	IEP	Predicted GO
BP	GO:0043207	response to external biotic stimulus	IEP	Predicted GO
CC	GO:0044798	nuclear transcription factor complex	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
BP	GO:0050832	defense response to fungus	IEP	Predicted GO
BP	GO:0051704	multi-organism process	IEP	Predicted GO
BP	GO:0051707	response to other organism	IEP	Predicted GO
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Predicted GO
BP	GO:0098542	defense response to other organism	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	158	212
IPR003657	WRKY_dom	342	398

External Links

No external refs found!

Brara.C01871.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation