Description : histone *(H4)
Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.C01885.1 | |
Cluster | HCAA Clusters: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
150847 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
167497 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
A4A49_57227 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
A4A49_58366 | No alias | histone h4 | 0.04 | Orthogroups_2024-Update | |
A4A49_59902 | No alias | histone h4 | 0.07 | Orthogroups_2024-Update | |
A4A49_60016 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
A4A49_61887 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
AC196961.2_FG003 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
AC212565.3_FG001 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
AC233865.1_FG001 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
At1g07820 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.07 | Orthogroups_2024-Update | |
At2g28740 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.04 | Orthogroups_2024-Update | |
At3g53730 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.05 | Orthogroups_2024-Update | |
At5g59690 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.04 | Orthogroups_2024-Update | |
Cre06.g264600 | No alias | histone H4 | 0.01 | Orthogroups_2024-Update | |
Cre06.g265050 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre06.g265200 | No alias | histone H4 | 0.04 | Orthogroups_2024-Update | |
Cre06.g265450 | No alias | histone H4 | 0.01 | Orthogroups_2024-Update | |
Cre06.g268000 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
Cre06.g268400 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre06.g271300 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
Cre06.g274150 | No alias | histone H4 | 0.01 | Orthogroups_2024-Update | |
Cre06.g274300 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
Cre06.g274900 | No alias | histone H4 | 0.04 | Orthogroups_2024-Update | |
Cre06.g275700 | No alias | histone H4 | 0.05 | Orthogroups_2024-Update | |
Cre06.g276650 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
Cre12.g504600 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
Cre12.g504850 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
Cre12.g505450 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre12.g506450 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g708650 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g709100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G084195 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G143780 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G149178 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.02G224100 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G146481 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G177800 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G177900 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G178200 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.12G074500 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G147000 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.14G190800 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.15G043200 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.17G063200 | No alias | histone H4 | 0.04 | Orthogroups_2024-Update | |
Glyma.18G064300 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G064401 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G083800 | No alias | histone H4 | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G020040.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G020060.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G029090.2 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G088160.1 | No alias | histone *(H4) | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G087830.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G011510.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
Kfl00106_g14 | kfl00106_g14_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
Kfl00240_g19 | kfl00240_g19_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
Kfl00394_0030 | kfl00394_0030_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_97951g0010 | No alias | (at5g59970 : 160.0) Histone superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Mp4g03080.1 | No alias | histone (H4) | 0.03 | Orthogroups_2024-Update | |
Mp4g03090.1 | No alias | histone (H4) | 0.02 | Orthogroups_2024-Update | |
Mp4g13440.1 | No alias | histone (H4) | 0.02 | Orthogroups_2024-Update | |
Mp5g22460.1 | No alias | histone (H4) | 0.02 | Orthogroups_2024-Update | |
Mp5g22470.1 | No alias | histone (H4) | 0.02 | Orthogroups_2024-Update | |
Pp1s378_30V6 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
Seita.2G301400.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
Seita.6G125400.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
Seita.7G212600.1 | No alias | histone *(H4) | 0.04 | Orthogroups_2024-Update | |
Seita.9G564200.1 | No alias | histone *(H4) | 0.01 | Orthogroups_2024-Update | |
Solyc04g011390 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.06 | Orthogroups_2024-Update | |
Solyc05g054610 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.05 | Orthogroups_2024-Update | |
Solyc06g005420 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.04 | Orthogroups_2024-Update | |
Solyc06g005430 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.09 | Orthogroups_2024-Update | |
Solyc06g075830 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.07 | Orthogroups_2024-Update | |
Solyc06g075850 | No alias | No description available | 0.07 | Orthogroups_2024-Update | |
Solyc06g075930 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.1 | Orthogroups_2024-Update | |
Solyc06g075960 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.07 | Orthogroups_2024-Update | |
Solyc11g066160 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.09 | Orthogroups_2024-Update | |
Solyc11g072840 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.06 | Orthogroups_2024-Update | |
Solyc11g072860 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.06 | Orthogroups_2024-Update | |
Sopen04g005580 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen05g033090 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen06g001390 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen06g001400 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen06g032260 | No alias | Core histone H2A/H2B/H3/H4 | 0.06 | Orthogroups_2024-Update | |
Sopen06g032280 | No alias | Core histone H2A/H2B/H3/H4 | 0.08 | Orthogroups_2024-Update | |
Sopen06g032360 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen06g032380 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen11g025930 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen11g030510 | No alias | Core histone H2A/H2B/H3/H4 | 0.06 | Orthogroups_2024-Update | |
Sopen11g030530 | No alias | Core histone H2A/H2B/H3/H4 | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_2255.1 | No alias | (at5g59970 : 154.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006754 | ATP biosynthetic process | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
CC | GO:0030118 | clathrin coat | IEP | Predicted GO |
CC | GO:0030125 | clathrin vesicle coat | IEP | Predicted GO |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Predicted GO |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046034 | ATP metabolic process | IEP | Predicted GO |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR035425 | CENP-T/H4_C | 93 | 149 |
No external refs found! |