Brara.C01885.1


Description : histone *(H4)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01885.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
150847 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
167497 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
A4A49_57227 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.07 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.03 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
AC233865.1_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.07 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.05 Orthogroups_2024-Update
At5g59690 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.04 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.04 Orthogroups_2024-Update
HORVU1Hr1G020040.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU1Hr1G020060.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU1Hr1G029090.2 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Pp1s378_30V6 No alias histone h4 0.03 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Seita.9G564200.1 No alias histone *(H4) 0.01 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.09 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.07 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.1 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.09 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.08 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g025930 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.08 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 93 149
No external refs found!