Brara.C01925.1

Description : Trihelix-type transcription factor

Gene families : OG_42_0002504 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002504_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C01925.1
Cluster	HCAA Clusters: Cluster_275

Target	Alias	Description	ECC score	Gene Family Method
At2g38250	No alias	Trihelix transcription factor GT-3b...	0.03	Orthogroups_2024-Update
Brara.B00025.1	No alias	Trihelix-type transcription factor	0.02	Orthogroups_2024-Update
Potri.003G104500	No alias	Homeodomain-like superfamily protein	0.03	Orthogroups_2024-Update
Solyc09g005560	No alias	Trihelix transcription factor GT-3b (AHRD V3.3 *** W9RYU5_9ROSA)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000444	MIS12/MIND type complex	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!