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  5. Brara.C01932.1

Brara.C01932.1


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01932.1
Cluster HCAA Clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
A4A49_38927 No alias pra1 family protein b4 0.04 Orthogroups_2024-Update
At3g13710 No alias PRA1 family protein F4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIC7] 0.04 Orthogroups_2024-Update
Brara.E00551.1 No alias B-G-class Rab-GDF protein 0.04 Orthogroups_2024-Update
Brara.F00553.1 No alias B-G-class Rab-GDF protein 0.06 Orthogroups_2024-Update
GRMZM2G050890 No alias PRA1 (Prenylated rab acceptor) family protein 0.04 Orthogroups_2024-Update
GRMZM2G089783 No alias prenylated RAB acceptor 1.B4 0.03 Orthogroups_2024-Update
GRMZM2G147862 No alias prenylated RAB acceptor 1.E 0.03 Orthogroups_2024-Update
Glyma.20G225600 No alias prenylated RAB acceptor 1.E 0.03 Orthogroups_2024-Update
LOC_Os01g61170 No alias prenylated rab acceptor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g41940 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.008G074000 No alias prenylated RAB acceptor 1.B4 0.03 Orthogroups_2024-Update
Potri.010G183300 No alias prenylated RAB acceptor 1.B4 0.03 Orthogroups_2024-Update
Sobic.003G341600.1 No alias B-G-class Rab-GDF protein 0.05 Orthogroups_2024-Update
Solyc06g050570 No alias PRA1 family protein (AHRD V3.3 *** K4C5K1_SOLLC) 0.06 Orthogroups_2024-Update
Solyc10g076360 No alias PRA1 family protein (AHRD V3.3 *** K4D1X8_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 53 195
No external refs found!