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  5. Brara.C01953.1

Brara.C01953.1


Description : STAR-type post-transcriptionally regulatory factor


Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01953.1
Cluster HCAA Clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
At3g08620 No alias KH domain-containing protein At3g08620... 0.03 Orthogroups_2024-Update
HORVU0Hr1G001050.1 No alias STAR-type post-transcriptionally regulatory factor 0.02 Orthogroups_2024-Update
HORVU0Hr1G001300.1 No alias STAR-type post-transcriptionally regulatory factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G064200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G069380.3 No alias STAR-type post-transcriptionally regulatory factor 0.02 Orthogroups_2024-Update
Sobic.003G381200.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
Solyc01g103410 No alias KH domain-containing protein (AHRD V3.3 *** W9R1Z3_9ROSA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032377 STAR_dimer 32 74
IPR004088 KH_dom_type_1 156 195
No external refs found!