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  5. Brara.C02130.1

Brara.C02130.1


Description : HSF-type transcription factor


Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02130.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
At5g62020 No alias HSFB2A [Source:UniProtKB/TrEMBL;Acc:A0A178UCK7] 0.03 Orthogroups_2024-Update
Bradi1g38140 No alias heat shock transcription factor C1 0.03 Orthogroups_2024-Update
Brara.B02421.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D00624.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I01903.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01849.1 No alias transcriptional regulator *(HsfA1) & HSF-type... 0.03 Orthogroups_2024-Update
Brara.K00418.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.03G135800 No alias heat shock transcription factor B3 0.04 Orthogroups_2024-Update
Glyma.05G095900 No alias heat shock factor 4 0.04 Orthogroups_2024-Update
Glyma.07G235600 No alias heat shock transcription factor B4 0.04 Orthogroups_2024-Update
Glyma.20G156800 No alias heat shock transcription factor B2A 0.04 Orthogroups_2024-Update
LOC_Os01g53220 No alias HSF-type DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_29913g0010 No alias (at3g22830 : 255.0) member of Heat Stress Transcription... 0.03 Orthogroups_2024-Update
PSME_00016852-RA No alias (at1g46264 : 151.0) Encodes SCHIZORIZA, a member of Heat... 0.03 Orthogroups_2024-Update
Potri.006G226800 No alias heat shock transcription factor A2 0.02 Orthogroups_2024-Update
Seita.4G237900.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G224200.1 No alias HSF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G225300.1 No alias HSF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G180300.2 No alias HSF-type transcription factor 0.02 Orthogroups_2024-Update
Solyc09g082670 No alias SolycHsfA6a 0.03 Orthogroups_2024-Update
Sopen08g018510 No alias HSF-type DNA-binding 0.02 Orthogroups_2024-Update
Sopen09g027410 No alias HSF-type DNA-binding 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 41 130
No external refs found!