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  5. Brara.C02141.1

Brara.C02141.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02141.1
Cluster HCAA Clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
A4A49_39097 No alias zinc finger protein 6 0.04 Orthogroups_2024-Update
Bradi1g14810 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Bradi1g76570 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Brara.B03462.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G139000 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
LOC_Os01g32920 No alias ZOS1-08 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g05900 No alias ZOS7-02 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
Potri.001G298700 No alias zinc finger protein 7 0.04 Orthogroups_2024-Update
Seita.2G034800.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.8G252000.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!