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  5. Brara.C02174.1

Brara.C02174.1


Description : Unknown function


Gene families : OG_42_0001046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02174.1
Cluster HCAA Clusters: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
Bradi1g52280 No alias MEI2-like protein 5 0.03 Orthogroups_2024-Update
Bradi3g44380 No alias MEI2-like protein 1 0.03 Orthogroups_2024-Update
Glyma.04G201200 No alias MEI2-like 4 0.03 Orthogroups_2024-Update
Potri.003G162700 No alias MEI2-like protein 1 0.03 Orthogroups_2024-Update
Pp1s271_57V6 No alias rna-binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 639 735
IPR000504 RRM_dom 182 246
IPR000504 RRM_dom 267 332
No external refs found!