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  5. Brara.C02214.1

Brara.C02214.1


Description : Unknown function


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02214.1
Cluster HCAA Clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
At2g43610 No alias Endochitinase At2g43610 [Source:UniProtKB/Swiss-Prot;Acc:O22842] 0.03 Orthogroups_2024-Update
GRMZM2G129189 No alias homolog of carrot EP3-3 chitinase 0.02 Orthogroups_2024-Update
LOC_Os02g39330 No alias CHIT1 - Chitinase family protein precursor, expressed 0.02 Orthogroups_2024-Update
MA_170598g0010 No alias (at2g43590 : 172.0) Chitinase family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00019563-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00029190-RA No alias (p29022|chia_maize : 256.0) Endochitinase A precursor... 0.02 Orthogroups_2024-Update
PSME_00036435-RA No alias (at3g54420 : 251.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
PSME_00036436-RA No alias (at3g54420 : 249.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00050767-RA No alias (p29022|chia_maize : 240.0) Endochitinase A precursor... 0.02 Orthogroups_2024-Update
PSME_00051412-RA No alias (at3g54420 : 249.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
PSME_00052222-RA No alias (at3g54420 : 236.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
Pp1s55_35V6 No alias chitinase 0.02 Orthogroups_2024-Update
Seita.7G150600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G132500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen04g027980 No alias Chitinase class I 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
MF GO:0008061 chitin binding IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 28 59
IPR000726 Glyco_hydro_19_cat 88 224
No external refs found!