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  5. Brara.C02254.1

Brara.C02254.1


Description : SRC2-clade calcium sensor & SRC1-clade calcium sensor


Gene families : OG_42_0001341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02254.1
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
At2g44310 No alias Calcium-binding EF-hand family protein... 0.04 Orthogroups_2024-Update
Glyma.10G160800 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
Glyma.15G217700 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
LOC_Os11g30180 No alias EF hand family protein, expressed 0.02 Orthogroups_2024-Update
Sopen01g033280 No alias EF-hand domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 24 98
No external refs found!