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  5. Brara.C02286.1

Brara.C02286.1


Description : autophagosome ubiquitin-fold protein *(ATG8)


Gene families : OG_42_0000932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02286.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At2g45170 No alias Autophagy-related protein 8e... 0.06 Orthogroups_2024-Update
At4g16520 No alias Ubiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520] 0.06 Orthogroups_2024-Update
Bradi3g14980 No alias Ubiquitin-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.G01770.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.02 Orthogroups_2024-Update
Cre16.g689650 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Mp5g05930.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Potri.002G144600 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G228800 No alias Ubiquitin-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.6G036300.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.04 Orthogroups_2024-Update
Solyc08g007400 No alias Autophagy-related protein (AHRD V3.3 *-* K4CIM7_SOLLC) 0.02 Orthogroups_2024-Update
Solyc08g078820 No alias Autophagy-related protein (AHRD V3.3 *** K4CNP1_SOLLC) 0.04 Orthogroups_2024-Update
Sopen03g005510 No alias Autophagy protein Atg8 ubiquitin like 0.02 Orthogroups_2024-Update
Sopen08g003350 No alias Autophagy protein Atg8 ubiquitin like 0.02 Orthogroups_2024-Update
Sopen08g027280 No alias Autophagy protein Atg8 ubiquitin like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004241 Atg8-like 15 118
No external refs found!