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  5. Brara.C02291.1

Brara.C02291.1


Description : Unknown function


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02291.1
Cluster HCAA Clusters: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
A4A49_40779 No alias putative pectinesterasepectinesterase inhibitor 34 0.03 Orthogroups_2024-Update
A4A49_40928 No alias putative pectinesterasepectinesterase inhibitor 40 0.07 Orthogroups_2024-Update
At1g11370 No alias Probable pectinesterase 56... 0.04 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.07G024200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.07G024300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.09G232100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.12 Orthogroups_2024-Update
Glyma.10G150700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.17 Orthogroups_2024-Update
Glyma.13G115200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.20G237800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
LOC_Os04g38560 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G162600 No alias pectin methylesterase 3 0.01 Orthogroups_2024-Update
Potri.015G127800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.018G051400 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Potri.T148300 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Potri.T151500 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Pp1s32_31V6 No alias putative pectin esterase [Oryza sativa (japonica cultivar-group)] 0.06 Orthogroups_2024-Update
Sobic.006G105500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.01 Orthogroups_2024-Update
Solyc07g064180 No alias pectin methylesterase 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 28 170
IPR000070 Pectinesterase_cat 240 278
No external refs found!