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  5. Brara.C02340.1

Brara.C02340.1


Description : Unknown function


Gene families : OG_42_0000762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02340.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g46950 No alias EF hand family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10212526g0010 No alias (at2g46600 : 81.6) Calcium-binding EF-hand family... 0.04 Orthogroups_2024-Update
MA_10435835g0010 No alias (at2g46600 : 85.1) Calcium-binding EF-hand family... 0.03 Orthogroups_2024-Update
MA_156275g0010 No alias (at2g46600 : 132.0) Calcium-binding EF-hand family... 0.05 Orthogroups_2024-Update
MA_1999194g0010 No alias (at2g46600 : 101.0) Calcium-binding EF-hand family... 0.04 Orthogroups_2024-Update
MA_48747g0010 No alias (at2g46600 : 135.0) Calcium-binding EF-hand family... 0.03 Orthogroups_2024-Update
MA_8089574g0010 No alias (at2g46600 : 98.6) Calcium-binding EF-hand family... 0.03 Orthogroups_2024-Update
Seita.4G255900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G234000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 55 104
No external refs found!