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  5. Brara.C02396.1

Brara.C02396.1


Description : E3 ubiquitin ligase *(XBAT3)


Gene families : OG_42_0001761 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.C02396.1
Cluster HCAA Clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
441660 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
At2g28840 No alias Putative E3 ubiquitin-protein ligase XBAT31... 0.03 Orthogroups_2024-Update
HORVU1Hr1G005260.10 No alias E3 ubiquitin ligase *(XBAT3) 0.04 Orthogroups_2024-Update
HORVU3Hr1G116350.2 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
HORVU4Hr1G059710.8 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
Solyc11g066020 No alias Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 195 232
IPR002110 Ankyrin_rpt 112 182
IPR002110 Ankyrin_rpt 39 108
No external refs found!