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  5. Brara.C02411.1

Brara.C02411.1


Description : transcriptional regulator *(FIT) of iron homeostasis & bHLH-type transcription factor


Gene families : OG_42_0000609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02411.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_21428 No alias transcription factor fer-like iron deficiency-induced... 0.02 Orthogroups_2024-Update
Bradi5g01900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g07720 No alias FER-like regulator of iron uptake 0.02 Orthogroups_2024-Update
GRMZM2G119823 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G166800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G066090.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G066100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G005550.1 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os04g23550 No alias basic helix-loop-helix family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431722g0010 No alias (at2g16910 : 96.7) Encodes a basic helix-loop helix... 0.02 Orthogroups_2024-Update
MA_196213g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_733169g0010 No alias (at2g16910 : 90.9) Encodes a basic helix-loop helix... 0.04 Orthogroups_2024-Update
PSME_00014660-RA No alias (at2g16910 : 101.0) Encodes a basic helix-loop helix... 0.03 Orthogroups_2024-Update
PSME_00047116-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sobic.004G140000.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G051800.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 131 174
No external refs found!