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  5. Brara.C02447.1

Brara.C02447.1


Description : MYB class-R2R3 subgroup-18 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02447.1
Cluster HCAA Clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.02 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.02 Orthogroups_2024-Update
At3g01530 No alias Transcription factor MYB57... 0.03 Orthogroups_2024-Update
At3g23250 No alias Transcription factor MYB15... 0.04 Orthogroups_2024-Update
Bradi4g04050 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi4g36210 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.D01882.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.F00557.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.05 Orthogroups_2024-Update
Brara.H00653.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J01871.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G115859 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
MA_140579g0010 No alias (at1g22640 : 213.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
Potri.001G086700 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.001G139900 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Potri.001G346600 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Potri.013G149100 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Pp1s133_87V6 No alias myb transcription factor 0.04 Orthogroups_2024-Update
Seita.5G239400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G283200.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G030000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G179800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G153200.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G055700.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc08g079270 No alias R2R3MYB transcription factor 42 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 22 69
IPR001005 SANT/Myb 75 118
No external refs found!