Brara.C02450.1


Description : hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0002941 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002941_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02450.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_03811 No alias hydroxymethylglutaryl-coa lyase, mitochondrial 0.05 Orthogroups_2024-Update
At2g26800 No alias Hydroxymethylglutaryl-CoA lyase, mitochondrial... 0.1 Orthogroups_2024-Update
Bradi4g43510 No alias Aldolase superfamily protein 0.03 Orthogroups_2024-Update
Pp1s138_43V6 No alias hydroxymethylglutaryl- lyase 0.02 Orthogroups_2024-Update
Seita.8G022200.1 No alias hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase 0.04 Orthogroups_2024-Update
Sobic.005G026100.1 No alias hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase 0.05 Orthogroups_2024-Update
Solyc11g065070 No alias Hydroxymethylglutaryl-CoA lyase (AHRD V3.3 *** W9QRW1_9ROSA) 0.06 Orthogroups_2024-Update
Sopen11g024810 No alias HMGL-like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000891 PYR_CT 170 443
No external refs found!