Brara.C02475.1

Description : transcriptional memory factor *(HsfA2) & HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C02475.1
Cluster	HCAA Clusters: Cluster_344

Target	Alias	Description	ECC score	Gene Family Method
107503	No alias	heat shock transcription factor A1D	0.02	Orthogroups_2024-Update
A4A49_29201	No alias	heat shock factor protein hsf24	0.04	Orthogroups_2024-Update
Brara.B00680.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.04	Orthogroups_2024-Update
Brara.I01903.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G125969	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.05G095900	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g25120	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G295900.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Solyc07g040680	No alias	SolycHsfA9	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Predicted GO
CC	GO:0005778	peroxisomal membrane	IEP	Predicted GO
BP	GO:0007031	peroxisome organization	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
CC	GO:0031903	microbody membrane	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
CC	GO:0045275	respiratory chain complex III	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO
MF	GO:0070403	NAD+ binding	IEP	Predicted GO
CC	GO:0070469	respiratory chain	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
CC	GO:0098805	whole membrane	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	46	135

External Links

No external refs found!

Brara.C02475.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation