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  5. Brara.C02483.1

Brara.C02483.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02483.1
Cluster HCAA Clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
421629 No alias FASCICLIN-like arabinogalactan 1 0.03 Orthogroups_2024-Update
441324 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.03 Orthogroups_2024-Update
Bradi5g04846 No alias FASCICLIN-like arabinogalactan protein 14 precursor 0.03 Orthogroups_2024-Update
Brara.A03323.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
LOC_Os04g21570 No alias fasciclin-like arabinogalactan precursor protein,... 0.02 Orthogroups_2024-Update
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.04 Orthogroups_2024-Update
Seita.2G154700.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Sobic.002G154600.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Solyc01g091530 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc07g045440 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 35 134
No external refs found!