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  5. Brara.C02554.1

Brara.C02554.1


Description : 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02554.1
Cluster HCAA Clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AC183932.3_FG007 No alias Cellulose-synthase-like C12 0.02 Orthogroups_2024-Update
At4g13410 No alias Probable glucomannan 4-beta-mannosyltransferase 15... 0.03 Orthogroups_2024-Update
Brara.A00614.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Brara.B00991.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.04 Orthogroups_2024-Update
GRMZM2G028286 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
GRMZM2G074792 No alias Cellulose-synthase-like C12 0.02 Orthogroups_2024-Update
Glyma.14G090000 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
HORVU3Hr1G074570.5 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Kfl00126_0150 kfl00126_0150_v1.1 (at3g28180 : 398.0) encodes a gene similar to cellulose... 0.02 Orthogroups_2024-Update
LOC_Os01g56130 No alias CSLC1 - cellulose synthase-like family C, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g03260 No alias CSLC10 - cellulose synthase-like family C, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g25900 No alias CSLC2 - cellulose synthase-like family C, expressed 0.02 Orthogroups_2024-Update
MA_10426467g0010 No alias (at5g03760 : 471.0) encodes a beta-mannan synthase that... 0.03 Orthogroups_2024-Update
MA_10426467g0020 No alias (at5g03760 : 280.0) encodes a beta-mannan synthase that... 0.03 Orthogroups_2024-Update
MA_10431741g0020 No alias (at4g07960 : 534.0) encodes a gene similar to cellulose... 0.03 Orthogroups_2024-Update
Pp1s15_115V6 No alias cellulose synthase-like glycosyltransferase family 2 0.02 Orthogroups_2024-Update
Pp1s373_28V6 No alias cellulose synthase-like glycosyltransferase family 2 0.03 Orthogroups_2024-Update
Pp1s65_194V6 No alias cellulose synthase-like A1, glycosyltransferase family 2... 0.03 Orthogroups_2024-Update
Seita.9G259400.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.02 Orthogroups_2024-Update
Solyc10g083670 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO) 0.04 Orthogroups_2024-Update
Sopen09g003750 No alias Glycosyltransferase like family 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 324 530
No external refs found!