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  5. Brara.C02606.1

Brara.C02606.1


Description : storage vacuole protein sorting receptor *(RMR)


Gene families : OG_42_0001930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001930_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C02606.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
At1g22670 No alias Receptor homology region, transmembrane domain- and RING... 0.03 Orthogroups_2024-Update
At1g35625 No alias Receptor homology region, transmembrane domain- and RING... 0.03 Orthogroups_2024-Update
GRMZM2G003656 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 234 277
IPR003137 PA_domain 80 143
No external refs found!