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  5. Brara.C02675.1

Brara.C02675.1


Description : E3 ubiquitin ligase *(BRH)


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.C02675.1
Cluster HCAA Clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_00047 No alias e3 ubiquitin-protein ligase rha2a 0.03 Orthogroups_2024-Update
A4A49_12023 No alias putative e3 ubiquitin-protein ligase xerico 0.04 Orthogroups_2024-Update
At4g11370 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Orthogroups_2024-Update
Bradi3g39110 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g04540 No alias RING-H2 finger protein 2B 0.02 Orthogroups_2024-Update
LOC_Os07g48680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g06090 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_169947g0010 No alias (at3g61460 : 156.0) Encodes a novel ring finger protein... 0.03 Orthogroups_2024-Update
MA_447489g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.1G273100.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Sobic.004G280900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G281400.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Sobic.006G189700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g054370 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 83 128
No external refs found!